MARE - Marine and Environmental Sciences Centre

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Publications

Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean

Publication . Sousa, Ricardo; Vasconcelos, Joana; Vera-Escalona, Iván; Delgado, João; Freitas, Mafalda; González, José A.; Riera, Rodrigo

Studies on microbial communities are pivotal to understand the role and the evolutionary paths of the host and their associated microorganisms in the ecosystems. Meta-genomics techniques have proven to be one of the most efective tools in the identifcation of endosymbiotic communities of host species. The microbiome of the highly exploited topshell Phorcus sauciatus was characterized in the Northeastern Atlantic (Portugal, Madeira, Selvagens, Canaries and Azores). Alpha diversity analysis based on observed OTUs showed signifcant diferences among regions. The Principal Coordinates Analysis of beta-diversity based on presence/absence showed three well diferentiated groups, one from Azores, a second from Madeira and the third one for mainland Portugal, Selvagens and the Canaries. The microbiome results may be mainly explained by large-scale oceanographic processes of the study region, i.e., the North Atlantic Subtropical Gyre, and specifcally by the Canary Current. Our results suggest the feasibility of microbiome as a model study to unravel biogeographic and evolutionary processes in marine species with high dispersive potential.

2021Journal article

Open access

The protection effects of marine protected areas on exploited molluscs from an oceanic archipelago

Publication . Sousa, Ricardo; Henriques, Paulo; Vasconcelos, Joana; Pinto, Ana Rita; Delgado, João; Riera, Rodrigo

1. Limpets are one of the most successful intertidal algal grazers in the north-eastern Atlantic. They provide valuable ecosystem services, playing a pivotal role in maintaining rocky shore ecological balance and have an important economic value, being subject to high levels of exploitation in several oceanic archipelagos. Limpets represent one of the most profitable economic activities of small-scale fisheries in the Madeira archipelago. However, limpets are extremely vulnerable to anthropogenic impacts, such as overharvesting, habitat fragmentation, and pollution. 2. The protection effects and the effectiveness of marine protected areas (MPAs) on the population dynamics of two historically highly exploited limpet species, Patella aspera and Patella candei, were analysed through a comparative study of size, reproduction, and biomass in the Madeira archipelago. 3. The effects of protection from MPAs on limpet populations resulted in a differential increase on size at first maturity, shell size, and capture per unit effort according to the degree of protection. 4. Old and enforced MPAs showed the best-preserved limpet populations in the study area, and both variables (age and enforcement) best explained the observed variability among the MPAs studied. 5. A thorough and multidisciplinary study is necessary to obtain a reliable picture of commercial stocks of the two targeted species (P. aspera and P. candei). Genetic analysis and studies on the food source of limpets may shed light to develop integrative conservation strategies.

2020Journal article

Open access

Pleistocene expansion, anthropogenic pressure and ocean currents: Disentangling the past and ongoing evolutionary history of Patella aspera Röding, 1798 in the archipelago of Madeira

Publication . Sousa, Ricardo; Vasconcelos, Joana; Vera-Escalona, Iván; Pinto, Ana Rita; Hawkins, S. J.; Freitas, Mafalda; Delgado, João; González, José A.; Riera, Rodrigo

Aims: Rising sea-level following the Last Glacial Maximum lead to fragmentation of coastal limpet populations between islands of the Archipelago of Madeira. This fragmentation is reinforced by recent heavy exploitation reducing effective population size on Madeira Island. We use the limpet P. aspera to understand how the role of processes at different time scales (i.e. changes in the sea level and overexploitation) can influence the genetic composition of an extant species, relating these processes to reproductive phenology and seasonal shifts in ocean currents. Location: Madeira Island, Porto Santo and Desertas (Archipelago of Madeira, NE Atlantic Ocean). Taxon: The limpet Patella aspera. Methods: Twelve microsatellite genetic markers were used. A power analysis was used to evaluate the power of the microsatellite markers to detect a signal of population differentiation. Long-term past migrations were assessed using a Bayesian Markov Montecarlo approach in the software MIGRATE-n to estimate mutation-scaled migration rates (M = m/μ; m, probability of a lineage immigrating per generation; μ, mutation rate). Two sce narios were evaluated using an Approximate Bayesian Computation (ABC) in the software DIYABC 2.1 (i) Sce nario 1: considered a population scenario from a reduced Ne at time t3 to a higher Ne at time t2; and (ii) Scenario 2 considering a reduction of Ne from a time t3 to a time t2. Results: Colonization of the archipelago by Portuguese settlers six centuries ago probably led to an important decrease in the genetic diversity of the species (Ne). Contemporary gene flow strongly support a pattern of high asymmetric connectivity explained by the reproductive phenology of the species and spatio-temporal seasonal changes in the ocean currents. Spatio-temporal reconstructions using Bayesian methods, including coalescent and Approximate Bayesian Computation (ABC) approaches, suggest changes in the migration patterns from highly symmetric to highly asymmetric connectivity with subtle population differentiation as consequence of post-glacial maximum sea level rise during the Holocene.

2021Journal article

Open access

Unravelling the effects of exploitation on the size–structure of the intertidal topshell Phorcus sauciatus in harvested and non-harvested Atlantic regions

Publication . Sousa, Ricardo; Vasconcelos, Joana; Riera, Rodrigo

Intertidal molluscs are keystone species often used as biological indicators of human-driven pertur bations. The increasing levels of harvesting pressure on these intertidal grazers, due to the expansion of human population on coastal areas, is known to affect negatively the exploited populations by altering population size–structure and decreasing abundances. A comparative study on the effect of harvest on the size–structure of Phorcus sauciatus populations was conducted according to the exploitation level, harvested and non-harvested, throughout the intertidal zone of mainland Portugal, Azores, Madeira, and the Canaries. The comparative analysis of the size–structure of 10,480 individuals of P. sauciatus showed that the largest individuals were recorded in the Azores and the smallest in Madeira. In harvested populations, P. sauciatus showed to be under greater harvesting pressure in the archipelago of Madeira, where the lowest mean size was observed. In the Canaries the harvesting is regulated whilst in the mainland Portugal the regulation is scarce. The Azores showed no harvesting pressure. Marine Protected Areas showed individuals with the highest mean sizes supporting their effectiveness in preserving the size–structure of this species, regardless the ecoregion and thus, the harvesting pressure. The present results highlight the importance of harvesting regulation of P. sauciatus in Madeira, as well as the implementation of management measures aiming at the sustainable exploitation and conservation of this species.

2020Journal article

Open access

Severe shifts of Zostera marina epifauna: comparative study between 1997 and 2018 on the Swedish Skagerrak coast

Publication . Riera, Rodrigo; Vasconcelos, Joana; Baden, Susanne; Gerhardt, Linda; Sousa, Ricardo; Infantes, Eduardo

The interaction between bottom-up and top-down processes in coastal ecosystems has been scarcely studied so far. Temporal changes in trophic interactions of Zostera marina along the Swedish west coast are relatively well studied, with the exception of epifaunal communities. Epifauna was used as a model study to explore resource (bottom-up) or predator (top-down) regulated in a vegetated ecosystem. We conducted a 21-year comparative study (1997 and 2018) using epifauna of 19 Zostera marina meadows along the Swedish Skagerrak coast. Large changes were observed in the composition of small (0.2–1 mm) and large (> 1 mm) epifauna. In the small-sized epifauna, the nematode Southernia zosterae and harpacticoids showed an increase of 90% and a decrease of 50% of their abundances, respectively. In the large-sized epifauna, the polychaete Platynereis dumerilii and chironomid larvae were absent in 1997 but thrived in 2018 (> 2000 ind. m−2 ). Mesoherbivores (Idoteids and gammarids) were locally very abundant in 1997 but disappeared in 2018. An 83% decline of mytilids settling in Zostera marina leaves was observed. Our results showed that epifauna is predominantly top-down regulated. An in tegrative framework of the study area is outlined to shed light on the causes and consequences of the en vironmental shifts reported in Zostera meadows from the northern Skagerrak area throughout the last three decades.

2020Journal article

Open access