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- Phytogeographical origin of Madeiran common beans based on phaseolin patternsPublication . Silva, Emanuel Marques da; Correia, Anísia Soraia Abreu; Lopes, Nuno Alexandre Amaral; Nóbrega, Humberto Gil Moreira; Ganança, José Filipe Teixeira; Domingues, Ana Maria; Khadem, Manhaz; Slaski, Jan Jacek; Carvalho, Miguel Ângelo Almeida Pinheiro deThe objective of this work was to determine the geographic origin of the Madeiran common bean (Phaseolus vulgaris) gene pool. Phaseolin patterns of 50 accessions representing the diversity of common bean collected in Madeira, Portugal, and conserved in the ISOPlexis Germplasm Bank, were analysed using the Experion automated electrophoresis system, based on lab-on-a-chip technology. Five common bean standard varieties with typical phaseolin patterns were used to determine the phytogeographical origin of the Madeiran common bean accessions. Ninety two percent of the accessions exhibited a phaseolin pattern consistent with the one of common bean types belonging to the Andean gene pool, while the origin of the remaining 8% of the accessions was indistinguishable. The application of a similarity coefficient of 85%, based on Pearson correlations, increases the number of accessions with uncertain pattern. The analytical approach used permitted the determination of the origin of the common bean gene pool, which is Andean in 98% of the cases, and clustering of the observed variability among the Madeiran common beans.
- Contributo para o conhecimento da agrodiversidade no concelho de Santa Cruz, MadeiraPublication . Carvalho, Miguel A. A. Pinheiro de; Ragonezi, Carla; Macedo, Fabrício Lopes de; Antunes, Gonçalo; Freitas, Gregório; Nóbrega, HumbertoO presente trabalho procura analisar as alterações sofridas pela agrodiversidade no território do Santa Cruz. Este concelho localizado na costa sul da Madeira tem 81,5 km2, quatro patamares bioclimáticos e numerosas unidades agroecológicas (UAE). A evolução da agrodiversidade iniciou-se, com o povoamento do Arquipélago, descoberto inabitado em 1418. A agrodiversidade biofísica, específica e intraespecífica aumentou e diversificou-se, devido à construção de agrossistemas, introdução de culturas, sucessão de ciclos agrícolas, adaptação às condições agroecológicas, aparecimento de pragas e doenças e pela ação do homem. Os registos históricos indicam a introdução de um elevado número de culturas, bem como a utilização de 72 espécies agrícolas, no concelho. E, indicam como fundamentais no povoamento e economia as culturas do trigo e as cerealíferas (cevada, centeio), cana-sacarina, vinha e sumagre. Várias outras culturas desempenharam um papel importante na economia do concelho, sendo cultivadas para fins alimentares, comerciais, industriais, culturais ou religiosos. A adaptação destas espécies aos agrossistemas e às condições agroecológicas deu origem a um número indeterminado de variedades locais. Apesar das limitações da documentação disponível, foram encontradas referências a variedades locais cuja cultura remonta há 140 a 500 anos, nomeadamente o Trigo da Serra, castas Malvasia e Tinta Antiga de Gaula, pêra Caniça, Banana da terra, feijão Corno de carneiro e Couve de João Ferino, que podem ser relacionadas com o historial do concelho. Porém, desde meados do século XX, a agrodiversidade sofreu uma drástica redução com a diminuição das áreas cultivadas, o abandono de várias espécies agrícolas e a extinção de variedades locais. A análise desta agrodiversidade foi realizada, a fim de apurar as alterações históricas e geográficas ocorridas na agrodiversidade em onze culturas representativas do concelho, visando a sustentabilidade agronómica.
- Structure and floristic composition associated with an endangered species Beta patula Aiton (Amaranthaceae) in the Islands of Madeira ArchipelagoPublication . Nóbrega, Humberto; Freitas, Gregório; Zavattieri, M. A.; Ragonezi, Carla; Carvalho, Miguel Â. A. Pinheiro deTwenty-two native Crop Wild Relatives (CWR) occur in specific dry environments of Madeira Archipelago, like Desembarcadouro islet in Ponta de São Lourenço and Chão islet in Desertas Islands. Nine of them share the same gene pool with crop species included in Annex I of the International Treaty on Plant Genetic Resources for Food and Agriculture. Amongst them, Beta patula Aiton, an IUCN Critically Endangered species, has been studied in detail for in situ and ex situ conservation. The present paper summarises the information recorded during the Beta patula population assessment. Valuable information on plant communities associated with this species was obtained.
- Screening for drought tolerance in thirty three Taro cultivarsPublication . Ganança, José F. T.; Freitas, José G. R.; Nóbrega, Humberto G.M.; Rodrigues, Vanessa; Antunes, Gonçalo; Gouveia, Carla S. S.; Rodrigues, Miguel; Chair, Hana; Carvalho, Miguel A. A. Pinheiro de; Lebot, VincentTaro [Colocasia esculenta (L.) Schott] is a root crop which is an important staple food in many regions of the world, producing 10.5 million tonnes on 1.4 million hectares a year. The crop is cultivated in wet (rain fed) or irrigated conditions, requiring on average 2,500 mm water per year, and in many countries it is cultivated in flooded plots. It is estimated that taro production could decrease by 40% as a result of the increase in drought and other severe events. In this work, thirty three accessions, including local cultivars, selected and hybrid lines were submitted to long duration drought stress and screened for tolerance. Twelve physiological, morphological and agronomic traits were measured at harvest, and subject to multivariate analysis. Stress indices, Water Use Efficiency and Factorial Analysis were useful for discriminating accessions regarding drought tolerance and yield stability, and drought tolerant and susceptible cultivars were identified. Our results confirm that different taro cultivars have different drought avoidance and tolerance strategies to cope with water scarcity. Better yield performers minimised biomass and canopy loss, while tolerance was observed in cultivars that presented low potential yield, but efficiently transferred resources to enhance corm formation. Among the 33 accessions, two local cultivars showed high yield stability and could be considered as suitable parents for breeding programs, while two others are well adapted to drought, but with overall low yield potential.
- Phenotyping the ideotypes of two maize landraces from Madeira archipelago using morpho-agronomic traits and zein patternPublication . Carvalho, Miguel Â. A. Pinheiro de; Sardinha, Carmen M. S.; Gouveia, Carla S.S.; Silva, Emanuel M. da; Nóbrega, Humberto G. M.; Ganança, José F. T.; Nóbrega, Sónia R.; Santos, Teresa M. M. dosMadeira Archipelago holds specific maize genetic resources whose populations, representing field diversity, were previously classified into four main landrace groups. The ISOPs 0061 and 0070, with common names of “Milho Sequeiro” and “Milho Branco” yellow and white maize, respectively, represent the ideotypes of two of these landraces. These ideotypes have now been analyzed using morpho-agronomic and biochemical traits, to phenotype these landraces. The variation of nine of the ten morpho-agronomic traits was used to separate the landraces ideotypes. However, the seven traits of seed biochemical composition did not allow to segregate the landraces ideotypes. This is not the case of zein pattern, which polymorphism shows to be specific for each ideotype. The original ideotypes populations were regenerated twice under low input conditions. Zein patterns of the original and regenerated accessions were compared, using two electrophoresis techniques. The lab-on-a-chip electrophoresis showed that the standard SDS-PAGE zein pattern with six fractions could be separated into eighteen (ISOP 0061) and twenty (ISOP 0070) protein bands. In contrast, no significant changes were detected in the zein pattern structure of the initial and regenerated accessions of both landraces ideotypes. The chip electrophoresis showed to be a suitable technique to screen and characterize a large number of individuals and accessions of the germplasm collections, due to its reproducibility. In particular, the zein patterns can be used to phenotype ideotypes and establish a formula representing their structure, allowing to detect changes in landrace structure, occurring as a result of gene bank management actions.
- Drought avoidance and phenotypic flexibility of sweet potato (Ipomoea batatas (L.) Lam.) under water scarcity conditionsPublication . Gouveia, Carla S. S.; Ganança, José F. T.; Nóbrega, Humberto G. M.; Freitas, José G. R.; Lebot, Vincent; Carvalho, Miguel Â. A. Pinheiro deSweet potato (Ipomoea batatas (L.) Lam.) is an important staple food in several regions of the world. Water scarcity is the most devastating abiotic stress, with a great impact on crop productivity, food security, and subsistence. Drought restricts the nutrient intake and transport into the plant. Tolerant crops have morphological mechanisms of drought avoidance and/or phenotypic flexibility, showing also good water and nutrient efficiency. However, that information is scarce for sweet potato, which is usually based on physiological traits of plant productivity. Here, we show the physiological responses of eight sweet potato accessions subjected to a 3 months’ drought period, by recording their differences for nutrient and leaf chlorophyll content, biomass and stress level. Our results showed that the differences in water use efficiency (WUE, +68.1%), chlorophyll content index (CCI, -5.3%), total plant biomass (TPB, -55.4%), nutrient efficiency (NER, +38.1%) and nutrient harvest index (NHI, +2.9%) where significantly correlated with the water regime. The water shortage led to a drought avoidance response, with TPB loss in all accessions. Distinct phenotypic flexibility responses were also recorded and explained by the root:shoot ratio (R:S) and stress index (SI) variation of the storage root and shoot growth. This information could be relevant for the development of sweet potato breeding programs, adapting this crop to climate change.
- Genetic variability of high molecular weight glutenin subunits in bread wheat from continental Portugal, Madeira and Canary IslandsPublication . Santos, Teresa M. M. dos; Nóbrega, Humberto; Ganança, José Filipe Teixeira; Silva, Emanuel; Afonso, Desire; Gutiérres, Abílio F. M.; Slaski, Jan J.; Khadem, Manhaz; Carvalho, Miguel Â. A. Pinheiro deThe genetic variability of high molecular weight glutenin subunits (HMWGS) composition at the Glu-1 loci in bread wheat (Triticum aestivum L.) was studied electrophoretically using the SDS–PAGE in 3,470 individuals representing 159 populations originated from the Canary Islands (Spain), the Archipelago of Madeira (Portugal) and the continental Portugal. A total of 25 alleles were detected, resulting in 69 different allele combinations. The geographical distribution of the high molecular weight glutenin alleles confirms historical data regarding circulation of wheat germplasm between the Iberian Peninsula and Madeira and between Madeira and the Canary Islands and vice versa.
- Monitoring system and in situ conservation of endemic and threatened Beta patula Aiton populations in Madeira RegionPublication . Nóbrega, H.; Freitas, G.; Zavattieri, M. A.; Ragonezi, C.; Frese, L.; Carvalho, M. A. A. Pinheiro det Madeira Archipelago is a hotspot for crop wild relatives (CWR) of crop cultures. Some of these CWR are present in very specific environments, such as, in Ponta de Sa˜o Lourenc¸o or Desertas Islands. One such species is Beta patula Aiton, a Critically Endan gered species which belongs to the Gene Pool 1b of cultivated beets. A continuous effort has been devel oped for its ex situ conservation through the storage of accessions (ISOP2512 and ISOP1911) in the ISO Plexis GeneBank at the University of Madeira Simultaneously, a series of studies have been carried out to understand the species’ ecogeographic and ecological requirements, to validate populations’ boundaries and sizes, and to establish population dynamics. This study includes a complete floristic survey at the B. patula locations of, Desembar cadouro islet (DI) with 12 (DI1–DI12) sampling sites, and Cha˜o islet (CI) with 3 (CI1–CI3). Several Biodiversity indices were calculated for these loca tions. Plot DI3 exhibited the highest values for Corrected Evenness (E0 = 0.77 ± 0.07), Shannon– Weaver Diversity Index (H0 = 2.48 ± 0.12), and Hill’s Index (N2 = 4.47 ± 0.72), with a total sum of 306 individuals of B. patula. The demographic status of B. patula populations in DI and CI was determined yearly between 2014 and 2018. The results show an average population size of 16,906 and 2917 plants, respectively. These data will be used for the estab lishment of a protocol to monitor and manage a genetic reserve for B. patula and other CWR. By doing so, our work will contribute to the implemen tation of the European genetic reserve network.
- Propagation of nine endemic plant species from Madeira Island (Portugal)Publication . Henriques, Dina; Fontinha, Susana; Neves, Margarida Costa; Nóbrega, Humberto; Ferro, António; Carvalho, M. A. A. Pinheiro deEfficient propagation of endangered plant species is a critical factor in successful ecological restoration and conscientious habitat management. Hence, propagation trials of nine endemic plant species of Madeira (Anthyllis lemanniana Lowe, Armeria maderensis Lowe, Cedronella canariensis (L.) Webb & Berthel., Erica maderensis (Benth.) Bornm., Genista tenera (Jacq. ex Murray) Kuntze, Helichrysum melaleucum Rchb. ex Holl, Pericallis aurita (L'Her.) B. Nord., Sideritis candicans Aiton and Teline maderensis Webb & Berthel.) were carried out. Plant propagation requirements and their sexual and vegetative propagation methods were studied. Seed germination success varied between species. Germination rate exceeded 70% in six out of nine species, being lower than 30% in Pericallis aurita, while H. melaleucum seeds did not germinate. Vegetative propagation yielded lower success rates, with three species (Erica maderensis, Genista tenera and Teline maderensis) unable to establish roots, and three species (Helichrysum melaleucum, Pericallis aurita and Sideritis candicans) exceeding 60% of the rooting success. Establishment of the propagation requirements of these species could be regarded an important tool for supporting Madeira’s flora conservation programs.
- Prospeção e caracterização dos recursos genéticos de macieira, Malus domestica Borkh, na MadeiraPublication . Gouveia, Carla S.S.; Ascarini, Fabio; Nóbrega, Humberto G. M. de; Freitas, José G. R. de; Carvalho, Miguel Â. A. Pinheiro deA Madeira possui condições agroecológicas únicas, que permitem o desenvolvimento de grande diversidade de espécies frutícolas. A macieira é uma fruteira tradicional na Madeira que se distribui pelas suas freguesias montanhosas, desde o Oeste, Achadas da Cruz, até o Este, Faial. O cultivo da macieira desenvolve-se em pequenos pomares, que albergam uma diversidade de cultivares, cuja produção é consumida em fresco ou utilizada na produção de sidra. A prospeção e inventariação dos recursos genéticos desta fruteira procura aprofundar os conhecimentos sobre a sua diversidade, tendo resultado no registo de 10 variedades de conservação no Catálogo Nacional de Variedades, entre as quais o Pero Domingos, a Maçã Barral, a Maçã Cara de Dama e o Pero Calhau. Os dados desta inventariação são disponibilizados, através das plataformas GRIN-Global e GBIF. Está em curso um projeto que visa a valorização destas variedades locais, através da sua caracterização morfo-agronómica e nutricional. O presente trabalho apresenta os resultados preliminares da caracterização morfométrica de 4 dessas variedades. Os parâmetros utilizados incluem o hábito de crescimento, época de floração, frutificação e colheita, e 10 caracteres morfológicos do fruto. Os resultados obtidos permitem-nos inferir que as 4 variedades são distintas entre si e apresentam características agronómicas que lhes conferem valor comercial. Adicionalmente, o fruto do Pero Domingos foi analisado em relação a 5 parâmetros nutricionais e físico-químicos, e à sua aptidão para consumo em fresco ou processado (desidratado, compotas, sidra). O Pero Domingos apresentou um bom tempo de conservação no pós-colheita. No entanto, recomenda-se o seu uso na produção de sidra ou confeção de compotas até 1 semana de pós-colheita. O teor de sólidos solúveis variou significativamente nas compotas. O pH da sidra diminuiu significativamente com a profundidade da coluna na pipa.